HL_7ZUX_109

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UGAUCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_109 not in the Motif Atlas

Homologous match to HL_8C3A_067

Geometric discrepancy: 0.0943

The information below is about HL_8C3A_067

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_65794.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7ZUX|1|5|U|3069
7ZUX|1|5|G|3070
7ZUX|1|5|A|3071
7ZUX|1|5|U|3072
7ZUX|1|5|C|3073
7ZUX|1|5|A|3074

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EQ

60S ribosomal protein L19-A

Chain ET

60S ribosomal protein L22-A

Chain Ec

60S ribosomal protein L31-A