HL_7ZUX_112

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGGAAAGG

Length

8 nucleotides

Bulged bases

7ZUX|1|5|A|3244, 7ZUX|1|5|A|3245

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_112 not in the Motif Atlas

Homologous match to HL_5TBW_069

Geometric discrepancy: 0.0617

The information below is about HL_5TBW_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_24596.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

7

Unit IDs

7ZUX|1|5|C|3241
7ZUX|1|5|G|3242
7ZUX|1|5|G|3243
7ZUX|1|5|A|3244
7ZUX|1|5|A|3245
7ZUX|1|5|A|3246
7ZUX|1|5|G|3247
7ZUX|1|5|G|3248

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EB

60S ribosomal protein L3

Chain EN

60S ribosomal protein L16-A