HL_7ZW0_004

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CCUUUG

Length

6 nucleotides

Bulged bases

7ZW0|1|2|U|194

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_004 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.2637

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7ZW0|1|2|C|190
7ZW0|1|2|C|191
7ZW0|1|2|U|192
7ZW0|1|2|U|193
7ZW0|1|2|U|194
7ZW0|1|2|G|195

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sV

40S ribosomal protein S8-A