HL_7ZW0_023

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUUUUUAAUG

Length

10 nucleotides

Bulged bases

7ZW0|1|2|U|1059

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_023 not in the Motif Atlas

Homologous match to HL_8P9A_212

Geometric discrepancy: 0.3824

The information below is about HL_8P9A_212

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97917.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7ZW0|1|2|U|1055
7ZW0|1|2|U|1056
7ZW0|1|2|U|1057
7ZW0|1|2|U|1058
7ZW0|1|2|U|1059
7ZW0|1|2|U|1060
7ZW0|1|2|A|1061
7ZW0|1|2|A|1062
7ZW0|1|2|U|1063
7ZW0|1|2|G|1064

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sQ

40S ribosomal protein S1-A

Chain sf

40S ribosomal protein S27-A

Chain sh

FAP1 isoform 1