3D structure

PDB id
7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
FAP-80S Complex - Rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CGAGAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ZW0_032 not in the Motif Atlas
Geometric match to HL_4V88_218
Geometric discrepancy: 0.0827
The information below is about HL_4V88_218
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
360

Unit IDs

7ZW0|1|2|C|1501
7ZW0|1|2|G|1502
7ZW0|1|2|A|1503
7ZW0|1|2|G|1504
7ZW0|1|2|A|1505
7ZW0|1|2|G|1506

Current chains

Chain 2
18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sH
40S ribosomal protein S18-A
Chain sI
40S ribosomal protein S19-A
Chain sk
FK506-binding protein 1

Coloring options:


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