HL_7ZW0_048

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CCUCGG

Length

6 nucleotides

Bulged bases

7ZW0|1|LA|U|545, 7ZW0|1|LA|C|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_048 not in the Motif Atlas

Geometric match to HL_5TBW_012

Geometric discrepancy: 0.2848

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

7ZW0|1|LA|C|543
7ZW0|1|LA|C|544
7ZW0|1|LA|U|545
7ZW0|1|LA|C|546
7ZW0|1|LA|G|547
7ZW0|1|LA|G|548

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains