HL_7ZW0_058

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CCUCAG

Length

6 nucleotides

Bulged bases

7ZW0|1|LA|C|959, 7ZW0|1|LA|A|962

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_058 not in the Motif Atlas

Homologous match to HL_8C3A_022

Geometric discrepancy: 0.1435

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7ZW0|1|LA|C|958
7ZW0|1|LA|C|959
7ZW0|1|LA|U|960
7ZW0|1|LA|C|961
7ZW0|1|LA|A|962
7ZW0|1|LA|G|963

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain Ld

60S ribosomal protein L28

Chain Le

60S ribosomal protein L29

Chain Lr

60S ribosomal protein L42-A