HL_7ZW0_062

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGAUGAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_062 not in the Motif Atlas

Homologous match to HL_8C3A_026

Geometric discrepancy: 0.0679

The information below is about HL_8C3A_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_44398.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7ZW0|1|LA|G|1148
7ZW0|1|LA|G|1149
7ZW0|1|LA|A|1150
7ZW0|1|LA|U|1151
7ZW0|1|LA|G|1152
7ZW0|1|LA|A|1153
7ZW0|1|LA|A|1154
7ZW0|1|LA|C|1155

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LC

5S ribosomal RNA; 5S rRNA

Chain LJ

60S ribosomal protein L7-A

Chain Lh

60S ribosomal protein L32

Chain Li

60S ribosomal protein L33-A