HL_7ZW0_074

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUUUAUC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_074 not in the Motif Atlas

Homologous match to HL_8C3A_038

Geometric discrepancy: 0.1354

The information below is about HL_8C3A_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75033.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

7ZW0|1|LA|G|1719
7ZW0|1|LA|U|1720
7ZW0|1|LA|U|1721
7ZW0|1|LA|U|1722
7ZW0|1|LA|A|1723
7ZW0|1|LA|U|1724
7ZW0|1|LA|C|1725

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LU

60S ribosomal protein L19-A

Chain Ls

60S ribosomal protein L43-A