HL_7ZW0_079

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7ZW0|1|LA|U|1925

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_079 not in the Motif Atlas

Homologous match to HL_8C3A_043

Geometric discrepancy: 0.0475

The information below is about HL_8C3A_043

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7ZW0|1|LA|C|1923
7ZW0|1|LA|U|1924
7ZW0|1|LA|U|1925
7ZW0|1|LA|C|1926
7ZW0|1|LA|G|1927
7ZW0|1|LA|G|1928

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain Lq

60S ribosomal protein L41-A

Chain Ls

60S ribosomal protein L43-A