HL_7ZW0_089

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CAUUCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_089 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.32

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7ZW0|1|LA|C|2568
7ZW0|1|LA|A|2569
7ZW0|1|LA|U|2570
7ZW0|1|LA|U|2571
7ZW0|1|LA|C|2572
7ZW0|1|LA|G|2573

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain Lc

60S ribosomal protein L27-A