3D structure

PDB id
7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
FAP-80S Complex - Rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
UUCAGUGUG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ZW0_094 not in the Motif Atlas
Homologous match to HL_8C3A_059
Geometric discrepancy: 0.0652
The information below is about HL_8C3A_059
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_34636.1
Basepair signature
cWW-cWW-F-F-F-F-F
Number of instances in this motif group
3

Unit IDs

7ZW0|1|LA|U|2724
7ZW0|1|LA|U|2725
7ZW0|1|LA|C|2726
7ZW0|1|LA|A|2727
7ZW0|1|LA|G|2728
7ZW0|1|LA|U|2729
7ZW0|1|LA|G|2730
7ZW0|1|LA|U|2731
7ZW0|1|LA|G|2732

Current chains

Chain LA
25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LT
60S ribosomal protein L18-A
Chain LW
60S ribosomal protein L21-A
Chain Ld
60S ribosomal protein L28
Chain Lr
60S ribosomal protein L42-A

Coloring options:


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