HL_7ZW0_105

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CGGAAAGG

Length

8 nucleotides

Bulged bases

7ZW0|1|LA|A|3243, 7ZW0|1|LA|A|3244

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_105 not in the Motif Atlas

Geometric match to HL_5TBW_069

Geometric discrepancy: 0.0761

The information below is about HL_5TBW_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_24596.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

7

Unit IDs

7ZW0|1|LA|C|3240
7ZW0|1|LA|G|3241
7ZW0|1|LA|G|3242
7ZW0|1|LA|A|3243
7ZW0|1|LA|A|3244
7ZW0|1|LA|A|3245
7ZW0|1|LA|G|3246
7ZW0|1|LA|G|3247

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LF

60S ribosomal protein L3

Chain LR

60S ribosomal protein L16-A