HL_7ZW0_109

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGUGAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_109 not in the Motif Atlas

Homologous match to HL_5TBW_186

Geometric discrepancy: 0.086

The information below is about HL_5TBW_186

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7ZW0|1|LC|G|88
7ZW0|1|LC|G|89
7ZW0|1|LC|U|90
7ZW0|1|LC|G|91
7ZW0|1|LC|A|92
7ZW0|1|LC|C|93

Current chains

Chain LC

5S ribosomal RNA (RDN5-1)

Nearby chains

Chain LA

Large subunit ribosomal RNA; LSU rRNA

Chain LJ

60S ribosomal protein L7-A

Chain LM

60S ribosomal protein L10

Chain LV

60S ribosomal protein L20-A