HL_7ZW0_111

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CACAUUG

Length

7 nucleotides

Bulged bases

7ZW0|1|LD|A|111, 7ZW0|1|LD|U|113

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_111 not in the Motif Atlas

Geometric match to HL_5TBW_075

Geometric discrepancy: 0.0888

The information below is about HL_5TBW_075

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22523.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

7ZW0|1|LD|C|108
7ZW0|1|LD|A|109
7ZW0|1|LD|C|110
7ZW0|1|LD|A|111
7ZW0|1|LD|U|112
7ZW0|1|LD|U|113
7ZW0|1|LD|G|114

Current chains

Chain LD

5.8S ribosomal RNA (RDN58-1)

Nearby chains

Chain LA

Large subunit ribosomal RNA; LSU rRNA

Chain La

60S ribosomal protein L25

Chain Lm

60S ribosomal protein L37-A

Chain Lo

60S ribosomal protein L39