HL_7ZW0_117

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUUAGCAUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_117 not in the Motif Atlas

Geometric match to HL_4V90_033

Geometric discrepancy: 0.1291

The information below is about HL_4V90_033

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_06059.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

51

Unit IDs

7ZW0|1|sn|C|31
7ZW0|1|sn|U|32
7ZW0|1|sn|U|33
7ZW0|1|sn|A|34
7ZW0|1|sn|G|35
7ZW0|1|sn|C|36
7ZW0|1|sn|A|37
7ZW0|1|sn|U|38
7ZW0|1|sn|G|39

Current chains

Chain sn

tRNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain sF

40S ribosomal protein S16-A

Chain sm

mRNA