HL_8A3L_097

3D structure

PDB id

8A3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into the binding of bS1 to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.42 Å

Loop

Sequence

UGAAGUAG

Length

8 nucleotides

Bulged bases

8A3L|1|a|G|2529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8A3L_097 not in the Motif Atlas

Homologous match to HL_5J7L_194

Geometric discrepancy: 0.1055

The information below is about HL_5J7L_194

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_31585.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

20

Unit IDs

8A3L|1|a|U|2528
8A3L|1|a|G|2529
8A3L|1|a|A|2530
8A3L|1|a|A|2531
8A3L|1|a|G|2532
8A3L|1|a|U|2533
8A3L|1|a|A|2534
8A3L|1|a|G|2535

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain g

50S ribosomal protein L6