HL_8A57_002
3D structure
- PDB id
- 8A57 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- UGUACGUAA
- Length
- 9 nucleotides
- Bulged bases
- 8A57|1|A|C|91
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8A57_002 not in the Motif Atlas
- Geometric match to HL_5TBW_022
- Geometric discrepancy: 0.2298
- The information below is about HL_5TBW_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
8A57|1|A|U|87
8A57|1|A|G|88
8A57|1|A|U|89
8A57|1|A|A|90
8A57|1|A|C|91
8A57|1|A|G|92
8A57|1|A|U|93
8A57|1|A|A|94
8A57|1|A|A|95
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L29
- Chain W
- 50S ribosomal protein L23
- Chain X
- 50S ribosomal protein L24
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