HL_8A57_053
3D structure
- PDB id
- 8A57 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 8A57|1|A|A|2301, 8A57|1|A|C|2308
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8A57_053 not in the Motif Atlas
- Geometric match to HL_7RQB_054
- Geometric discrepancy: 0.0648
- The information below is about HL_7RQB_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.6
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8A57|1|A|C|2297
8A57|1|A|U|2298
8A57|1|A|A|2299
8A57|1|A|A|2300
8A57|1|A|A|2301
8A57|1|A|G|2302
8A57|1|A|A|2303
8A57|1|A|G|2304
8A57|1|A|U|2305
8A57|1|A|A|2306
8A57|1|A|A|2307
8A57|1|A|C|2308
8A57|1|A|G|2309
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain P
- 50S ribosomal protein L16
- Chain Z
- 50S ribosomal protein L27
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