HL_8A57_072
3D structure
- PDB id
- 8A57 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- AGAAAUU
- Length
- 7 nucleotides
- Bulged bases
- 8A57|1|A|A|827, 8A57|1|A|U|830
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8A57_072 not in the Motif Atlas
- Homologous match to HL_7A0S_023
- Geometric discrepancy: 0.1776
- The information below is about HL_7A0S_023
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_51020.2
- Basepair signature
- cWW-cSW-F
- Number of instances in this motif group
- 14
Unit IDs
8A57|1|A|A|825
8A57|1|A|G|826
8A57|1|A|A|827
8A57|1|A|A|828
8A57|1|A|A|829
8A57|1|A|U|830
8A57|1|A|U|831
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L2
Coloring options: