HL_8AGT_082
3D structure
- PDB id
- 8AGT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast RQC complex in state F
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUUAGCAUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8AGT_082 not in the Motif Atlas
- Geometric match to HL_5TBW_018
- Geometric discrepancy: 0.3563
- The information below is about HL_5TBW_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84570.1
- Basepair signature
- cWW-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
8AGT|1|y|C|31
8AGT|1|y|U|32
8AGT|1|y|U|33
8AGT|1|y|A|34
8AGT|1|y|G|35
8AGT|1|y|C|36
8AGT|1|y|A|37
8AGT|1|y|U|38
8AGT|1|y|G|39
Current chains
- Chain y
- P-site petidyl-tRNA
Nearby chains
- Chain a
- Ribosome quality control complex subunit 2
- Chain v
- Eukaryotic translation initiation factor 5A-1
Coloring options: