HL_8AGU_057
3D structure
- PDB id
- 8AGU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast RQC complex in state E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AACAGAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8AGU_057 not in the Motif Atlas
- Homologous match to HL_8C3A_057
- Geometric discrepancy: 0.1155
- The information below is about HL_8C3A_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_72777.1
- Basepair signature
- cWW-F-cWH-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
8AGU|1|f|A|2673
8AGU|1|f|A|2674
8AGU|1|f|C|2675
8AGU|1|f|A|2676
8AGU|1|f|G|2677
8AGU|1|f|A|2678
8AGU|1|f|A|2679
8AGU|1|f|A|2680
8AGU|1|f|U|2681
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain a
- RQC2 isoform 1
- Chain s
- BJ4_G0027750.mRNA.1.CDS.1
Coloring options: