HL_8AGU_072

3D structure

PDB id

8AGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast RQC complex in state E

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

8AGU|1|f|U|3351

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8AGU_072 not in the Motif Atlas

Geometric match to HL_5VW1_002

Geometric discrepancy: 0.1982

The information below is about HL_5VW1_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

8AGU|1|f|C|3350
8AGU|1|f|U|3351
8AGU|1|f|U|3352
8AGU|1|f|G|3353

Current chains

Chain f

25S rRNA

Nearby chains