HL_8ANY_007

3D structure

PDB id

8ANY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

UAAAAGA

Length

7 nucleotides

Bulged bases

8ANY|1|A|G|1939

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ANY_007 not in the Motif Atlas

Geometric match to HL_5J7L_179

Geometric discrepancy: 0.3259

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

8ANY|1|A|U|1934
8ANY|1|A|A|1935
8ANY|1|A|A|1936
8ANY|1|A|A|1937
8ANY|1|A|A|1938
8ANY|1|A|G|1939
8ANY|1|A|A|1940

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain A3

Aurora kinase A-interacting protein

Chain D

39S ribosomal protein L2, mitochondrial