HL_8ANY_050
3D structure
- PDB id
- 8ANY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GA(5MU)UAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 8ANY|1|AA|U|1081
- QA status
- Modified nucleotides: 5MU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ANY_050 not in the Motif Atlas
- Geometric match to HL_4LFB_017
- Geometric discrepancy: 0.0781
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
8ANY|1|AA|G|1074
8ANY|1|AA|A|1075
8ANY|1|AA|5MU|1076
8ANY|1|AA|U|1077
8ANY|1|AA|A|1078
8ANY|1|AA|G|1079
8ANY|1|AA|A|1080
8ANY|1|AA|U|1081
8ANY|1|AA|A|1082
8ANY|1|AA|C|1083
8ANY|1|AA|C|1084
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain AF
- 28S ribosomal protein S7, mitochondrial
- Chain AI
- 28S ribosomal protein S11, mitochondrial
- Chain AQ
- 28S ribosomal protein S21, mitochondrial
- Chain Ax
- Transfer RNA; tRNA
- Chain Ay
- Transfer RNA; tRNA
- Chain Az
- mRNA
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