HL_8ANY_051
3D structure
- PDB id
- 8ANY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- UAAAUCAACAAA
- Length
- 12 nucleotides
- Bulged bases
- 8ANY|1|AA|A|1118, 8ANY|1|AA|A|1125
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ANY_051 not in the Motif Atlas
- Geometric match to HL_5TBW_022
- Geometric discrepancy: 0.3563
- The information below is about HL_5TBW_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
8ANY|1|AA|U|1115
8ANY|1|AA|A|1116
8ANY|1|AA|A|1117
8ANY|1|AA|A|1118
8ANY|1|AA|U|1119
8ANY|1|AA|C|1120
8ANY|1|AA|A|1121
8ANY|1|AA|A|1122
8ANY|1|AA|C|1123
8ANY|1|AA|A|1124
8ANY|1|AA|A|1125
8ANY|1|AA|A|1126
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A2
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
- Chain AB
- 28S ribosomal protein S2, mitochondrial
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AE
- 28S ribosomal protein S6, mitochondrial
- Chain AS
- 28S ribosomal protein S23, mitochondrial
- Chain AW
- 28S ribosomal protein S28, mitochondrial
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