HL_8ANY_069
3D structure
- PDB id
- 8ANY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GUUCAAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ANY_069 not in the Motif Atlas
- Geometric match to HL_4V9Q_215
- Geometric discrepancy: 0.2086
- The information below is about HL_4V9Q_215
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.4
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 137
Unit IDs
8ANY|1|Ay|G|53
8ANY|1|Ay|U|54
8ANY|1|Ay|U|55
8ANY|1|Ay|C|56
8ANY|1|Ay|A|57
8ANY|1|Ay|A|58
8ANY|1|Ay|U|59
8ANY|1|Ay|U|60
8ANY|1|Ay|C|61
Current chains
- Chain Ay
- E/E-tRNA
Nearby chains
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
- Chain z
- 39S ribosomal protein L1, mitochondrial
Coloring options: