HL_8AP4_002

3D structure

PDB id

8AP4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCAAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8AP4_002 not in the Motif Atlas

Homologous match to HL_5HR7_005

Geometric discrepancy: 0.4976

The information below is about HL_5HR7_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.2

Basepair signature

cWW-F-F

Number of instances in this motif group

5

Unit IDs

8AP4|1|Z|G|31
8AP4|1|Z|C|32
8AP4|1|Z|A|37
8AP4|1|Z|A|38
8AP4|1|Z|C|39

Current chains

Chain Z

P-tRNA

Nearby chains

Chain A

Heat shock protein 15