HL_8AYE_033
3D structure
- PDB id
- 8AYE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome bound to thermorubin and fMet-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.96 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8AYE_033 not in the Motif Atlas
- Homologous match to HL_5E81_212
- Geometric discrepancy: 0.0796
- The information below is about HL_5E81_212
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
8AYE|1|Z|G|31
8AYE|1|Z|C|32
8AYE|1|Z|U|33
8AYE|1|Z|C|34
8AYE|1|Z|A|35
8AYE|1|Z|U|36
8AYE|1|Z|A|37
8AYE|1|Z|A|38
8AYE|1|Z|C|39
Current chains
- Chain Z
- P-site tRNA-fMet
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain I
- 30S ribosomal protein S9
- Chain X
- mRNA
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