HL_8B0X_032

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

GUUCAAAUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33597.1

Basepair signature

cWW-tWH-F-F-F-F-F

Number of instances in this motif group

96

Unit IDs

8B0X|1|Z|G|53
8B0X|1|Z|U|54
8B0X|1|Z|U|55
8B0X|1|Z|C|56
8B0X|1|Z|A|57
8B0X|1|Z|A|58
8B0X|1|Z|A|59
8B0X|1|Z|U|60
8B0X|1|Z|C|61

Current chains

Chain Z

P-site tRNA

Nearby chains

Chain a

Large subunit ribosomal RNA; LSU rRNA

Chain f

50S ribosomal protein L5

Chain l

50S ribosomal protein L16