HL_8B0X_081

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

8B0X|1|a|A|2272, 8B0X|1|a|C|2279

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_02042.1

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

12

Unit IDs

8B0X|1|a|C|2268
8B0X|1|a|U|2269
8B0X|1|a|A|2270
8B0X|1|a|A|2271
8B0X|1|a|A|2272
8B0X|1|a|G|2273
8B0X|1|a|A|2274
8B0X|1|a|G|2275
8B0X|1|a|U|2276
8B0X|1|a|A|2277
8B0X|1|a|A|2278
8B0X|1|a|C|2279
8B0X|1|a|G|2280

Current chains

Chain a

23S rRNA

Nearby chains

Chain l

50S ribosomal protein L16

Chain v

50S ribosomal protein L27