HL_8B2L_029

3D structure

PDB id

8B2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UUAAGACAGCGCCGAA

Length

16 nucleotides

Bulged bases

8B2L|1|A3|A|1233

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B2L|1|A3|U|1230
8B2L|1|A3|U|1231
8B2L|1|A3|A|1232
8B2L|1|A3|A|1233
8B2L|1|A3|G|1234
8B2L|1|A3|A|1235
8B2L|1|A3|C|1236
8B2L|1|A3|A|1237
8B2L|1|A3|G|1238
8B2L|1|A3|C|1239
8B2L|1|A3|G|1294
8B2L|1|A3|C|1295
8B2L|1|A3|C|1296
8B2L|1|A3|G|1297
8B2L|1|A3|A|1298
8B2L|1|A3|A|1299

Current chains

Chain A3

25S rRNA

Nearby chains

Chain I3

60S ribosomal protein L18a

Chain Y3

ubiquitin-60S ribosomal protein L40