HL_8B2L_121

3D structure

PDB id

8B2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGCACUGCC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B2L|1|A3|G|2540
8B2L|1|A3|G|2541
8B2L|1|A3|C|2542
8B2L|1|A3|A|2543
8B2L|1|A3|C|2544
8B2L|1|A3|U|2545
8B2L|1|A3|G|2546
8B2L|1|A3|C|2547
8B2L|1|A3|C|2548

Current chains

Chain A3

25S rRNA

Nearby chains

Chain F1

40S ribosomal protein S3a

Chain T3

60S ribosomal protein L34

Chain c3

60S ribosomal protein L7a