HL_8B5L_015

3D structure

PDB id

8B5L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated Protein) translocon complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CGUCGCGGCGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8B5L|1|5|C|1130
8B5L|1|5|G|1131
8B5L|1|5|U|1132
8B5L|1|5|C|1133
8B5L|1|5|G|1134
8B5L|1|5|C|1135
8B5L|1|5|G|1136
8B5L|1|5|G|1205
8B5L|1|5|C|1206
8B5L|1|5|G|1207
8B5L|1|5|C|1208
8B5L|1|5|G|1209

Current chains

Chain 5

28S rRNA

Nearby chains

Chain b

60S ribosomal protein L29