HL_8BGH_043
3D structure
- PDB id
- 8BGH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- UUUAUUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 8BGH|1|0|A|1780, 8BGH|1|0|U|1781, 8BGH|1|0|U|1782, 8BGH|1|0|A|1786
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BGH_043 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.1539
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8BGH|1|0|U|1777
8BGH|1|0|U|1778
8BGH|1|0|U|1779
8BGH|1|0|A|1780
8BGH|1|0|U|1781
8BGH|1|0|U|1782
8BGH|1|0|A|1783
8BGH|1|0|A|1784
8BGH|1|0|A|1785
8BGH|1|0|A|1786
8BGH|1|0|A|1787
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain A
- 50S ribosomal protein L2
- Chain c
- 50S ribosomal protein L34
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