HL_8BH4_046
3D structure
- PDB id
- 8BH4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 8BH4|1|0|A|1913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BH4_046 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.1713
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8BH4|1|0|G|1910
8BH4|1|0|U|1911
8BH4|1|0|A|1912
8BH4|1|0|A|1913
8BH4|1|0|C|1914
8BH4|1|0|U|1915
8BH4|1|0|A|1916
8BH4|1|0|U|1917
8BH4|1|0|A|1918
8BH4|1|0|A|1919
8BH4|1|0|C|1920
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- Transfer RNA; tRNA
- Chain 5
- Transfer RNA; tRNA
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