HL_8BH6_005

3D structure

PDB id

8BH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mature 30S ribosomal subunit from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUCUUGC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BH6_005 not in the Motif Atlas

Geometric match to HL_8C3A_221

Geometric discrepancy: 0.2992

The information below is about HL_8C3A_221

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.3

Basepair signature

cWW-F-F

Number of instances in this motif group

23

Unit IDs

8BH6|1|a|G|217
8BH6|1|a|U|218
8BH6|1|a|C|219
8BH6|1|a|U|220
8BH6|1|a|U|221
8BH6|1|a|G|222
8BH6|1|a|C|223

Current chains

Chain a

16S ribosomal RNA

Nearby chains