HL_8BHF_032

3D structure

PDB id

8BHF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGGCCAUGGAAGUCGGAAUC

Length

21 nucleotides

Bulged bases

8BHF|1|A2|U|1974

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHF|1|A2|G|1973
8BHF|1|A2|U|1974
8BHF|1|A2|G|1975
8BHF|1|A2|G|1976
8BHF|1|A2|C|1977
8BHF|1|A2|C|1978
8BHF|1|A2|A|1979
8BHF|1|A2|U|1980
8BHF|1|A2|G|1981
8BHF|1|A2|G|1982
8BHF|1|A2|A|1983
8BHF|1|A2|A|1984
8BHF|1|A2|G|1985
8BHF|1|A2|U|1986
8BHF|1|A2|C|1987
8BHF|1|A2|G|1988
8BHF|1|A2|G|1989
8BHF|1|A2|A|1990
8BHF|1|A2|A|1991
8BHF|1|A2|U|1992
8BHF|1|A2|C|1993

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain f1

60S ribosomal protein L12