HL_8BHF_034
3D structure
- PDB id
- 8BHF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAGUCGGCAGAGCGAGAAAGAGAGUGGCGCGGACGCUACG
- Length
- 40 nucleotides
- Bulged bases
- 8BHF|1|A2|C|2094, 8BHF|1|A2|U|2270, 8BHF|1|A2|C|2272
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BHF|1|A2|C|2087
8BHF|1|A2|A|2088
8BHF|1|A2|G|2089
8BHF|1|A2|U|2090
8BHF|1|A2|C|2091
8BHF|1|A2|G|2092
8BHF|1|A2|G|2093
8BHF|1|A2|C|2094
8BHF|1|A2|A|2095
8BHF|1|A2|G|2096
8BHF|1|A2|A|2097
8BHF|1|A2|G|2098
8BHF|1|A2|C|2099
8BHF|1|A2|G|2100
8BHF|1|A2|A|2101
8BHF|1|A2|G|2102
8BHF|1|A2|A|2103
8BHF|1|A2|A|2104
8BHF|1|A2|A|2105
8BHF|1|A2|G|2106
8BHF|1|A2|A|2107
8BHF|1|A2|G|2108
8BHF|1|A2|A|2109
8BHF|1|A2|G|2110
8BHF|1|A2|U|2111
8BHF|1|A2|G|2112
8BHF|1|A2|G|2113
8BHF|1|A2|C|2261
8BHF|1|A2|G|2262
8BHF|1|A2|C|2263
8BHF|1|A2|G|2264
8BHF|1|A2|G|2265
8BHF|1|A2|A|2266
8BHF|1|A2|C|2267
8BHF|1|A2|G|2268
8BHF|1|A2|C|2269
8BHF|1|A2|U|2270
8BHF|1|A2|A|2271
8BHF|1|A2|C|2272
8BHF|1|A2|G|2273
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain D1
- Ribosomal protein L18
- Chain O1
- 60S ribosomal protein L29
- Chain d1
- 60S ribosomal protein L28
- Chain l3
- 60S ribosomal protein L4
- Chain n3
- 60S ribosomal protein L6
- Chain o3
- 60S ribosomal protein L7
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