HL_8BHF_095

3D structure

PDB id

8BHF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUAUUUUGUUGGUUUUCGG

Length

19 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHF|1|A3|C|884
8BHF|1|A3|U|885
8BHF|1|A3|A|886
8BHF|1|A3|U|887
8BHF|1|A3|U|888
8BHF|1|A3|U|889
8BHF|1|A3|U|890
8BHF|1|A3|G|891
8BHF|1|A3|U|892
8BHF|1|A3|U|893
8BHF|1|A3|G|894
8BHF|1|A3|G|895
8BHF|1|A3|U|896
8BHF|1|A3|U|897
8BHF|1|A3|U|898
8BHF|1|A3|U|899
8BHF|1|A3|C|900
8BHF|1|A3|G|901
8BHF|1|A3|G|902

Current chains

Chain A3

18S ribosomal RNA

Nearby chains

Chain H3

40S ribosomal protein S6

Chain M3

40S ribosomal protein S11