HL_8BHF_116
3D structure
- PDB id
- 8BHF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGAAUUGCAGGUUGAUC
- Length
- 18 nucleotides
- Bulged bases
- 8BHF|1|C2|U|86
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BHF|1|C2|G|68
8BHF|1|C2|U|69
8BHF|1|C2|G|70
8BHF|1|C2|A|71
8BHF|1|C2|A|72
8BHF|1|C2|U|73
8BHF|1|C2|U|74
8BHF|1|C2|G|75
8BHF|1|C2|C|76
8BHF|1|C2|A|77
8BHF|1|C2|G|78
8BHF|1|C2|G|79
8BHF|1|C2|U|85
8BHF|1|C2|U|86
8BHF|1|C2|G|87
8BHF|1|C2|A|88
8BHF|1|C2|U|89
8BHF|1|C2|C|90
Current chains
- Chain C2
- 5.8S ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain L1
- Ribosomal protein L26
- Chain U1
- 60S ribosomal protein L35
- Chain W1
- Ribosomal protein L37
- Chain Y1
- 60S ribosomal protein L39-like
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