HL_8BHJ_011
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- GUGACAGCC
- Length
- 9 nucleotides
- Bulged bases
- 8BHJ|1|0|G|329, 8BHJ|1|0|A|330, 8BHJ|1|0|C|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BHJ_011 not in the Motif Atlas
- Homologous match to HL_5J7L_144
- Geometric discrepancy: 0.1707
- The information below is about HL_5J7L_144
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
8BHJ|1|0|G|327
8BHJ|1|0|U|328
8BHJ|1|0|G|329
8BHJ|1|0|A|330
8BHJ|1|0|C|331
8BHJ|1|0|A|332
8BHJ|1|0|G|333
8BHJ|1|0|C|334
8BHJ|1|0|C|335
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain C
- 50S ribosomal protein L4
- Chain R
- 50S ribosomal protein L24
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