HL_8BHJ_053
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 8BHJ|1|0|A|2268, 8BHJ|1|0|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BHJ_053 not in the Motif Atlas
- Homologous match to HL_5J7L_187
- Geometric discrepancy: 0.1406
- The information below is about HL_5J7L_187
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91939.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
8BHJ|1|0|C|2264
8BHJ|1|0|U|2265
8BHJ|1|0|A|2266
8BHJ|1|0|A|2267
8BHJ|1|0|A|2268
8BHJ|1|0|G|2269
8BHJ|1|0|A|2270
8BHJ|1|0|G|2271
8BHJ|1|0|U|2272
8BHJ|1|0|A|2273
8BHJ|1|0|A|2274
8BHJ|1|0|C|2275
8BHJ|1|0|G|2276
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain J
- 50S ribosomal protein L16
- Chain T
- 50S ribosomal protein L27
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