HL_8BHJ_063
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- CGAGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BHJ_063 not in the Motif Atlas
- Geometric match to HL_5J7L_179
- Geometric discrepancy: 0.1371
- The information below is about HL_5J7L_179
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_04783.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8BHJ|1|0|C|2658
8BHJ|1|0|G|2659
8BHJ|1|0|A|2660
8BHJ|1|0|G|2661
8BHJ|1|0|A|2662
8BHJ|1|0|G|2663
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
- Chain E
- 50S ribosomal protein L6
Coloring options: