HL_8BHL_059

3D structure

PDB id

8BHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

UGAAGUAG

Length

8 nucleotides

Bulged bases

8BHL|1|0|G|2529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHL_059 not in the Motif Atlas

Homologous match to HL_5J7L_194

Geometric discrepancy: 0.1251

The information below is about HL_5J7L_194

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_31585.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

20

Unit IDs

8BHL|1|0|U|2528
8BHL|1|0|G|2529
8BHL|1|0|A|2530
8BHL|1|0|A|2531
8BHL|1|0|G|2532
8BHL|1|0|U|2533
8BHL|1|0|A|2534
8BHL|1|0|G|2535

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain E

50S ribosomal protein L6

Chain e

50S ribosomal protein L36