3D structure

PDB id
8BHN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
UGAAUGGAAG
Length
10 nucleotides
Bulged bases
8BHN|1|0|A|2406
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8BHN_057 not in the Motif Atlas
Homologous match to HL_5J7L_192
Geometric discrepancy: 0.1347
The information below is about HL_5J7L_192
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_53454.2
Basepair signature
cWW-tSH-F-F-F-F-F
Number of instances in this motif group
6

Unit IDs

8BHN|1|0|U|2404
8BHN|1|0|G|2405
8BHN|1|0|A|2406
8BHN|1|0|A|2407
8BHN|1|0|U|2408
8BHN|1|0|G|2409
8BHN|1|0|G|2410
8BHN|1|0|A|2411
8BHN|1|0|A|2412
8BHN|1|0|G|2413

Current chains

Chain 0
23S rRNA RRLG-RRNA

Nearby chains

Chain I
50S ribosomal protein L15

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.3001 s