HL_8BHN_064

3D structure

PDB id

8BHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

8BHN|1|0|G|2751, 8BHN|1|0|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHN_064 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.1391

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

8BHN|1|0|C|2745
8BHN|1|0|U|2746
8BHN|1|0|G|2747
8BHN|1|0|A|2748
8BHN|1|0|A|2749
8BHN|1|0|A|2750
8BHN|1|0|G|2751
8BHN|1|0|C|2752
8BHN|1|0|A|2753
8BHN|1|0|U|2754
8BHN|1|0|C|2755
8BHN|1|0|U|2756
8BHN|1|0|A|2757
8BHN|1|0|A|2758
8BHN|1|0|G|2759

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain E

50S ribosomal protein L6

Chain G

50S ribosomal protein L13

Chain e

50S ribosomal protein L36