HL_8BHP_013

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

8BHP|1|0|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHP_013 not in the Motif Atlas

Homologous match to HL_7A0S_014

Geometric discrepancy: 0.1404

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

8BHP|1|0|G|410
8BHP|1|0|G|411
8BHP|1|0|A|412
8BHP|1|0|C|413
8BHP|1|0|C|414
8BHP|1|0|A|415
8BHP|1|0|U|416
8BHP|1|0|C|417

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains