3D structure

PDB id
8BHP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.37 Å

Loop

Sequence
UUUAGG
Length
6 nucleotides
Bulged bases
8BHP|1|0|U|827, 8BHP|1|0|G|830
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8BHP_024 not in the Motif Atlas
Homologous match to HL_7RQB_025
Geometric discrepancy: 0.0907
The information below is about HL_7RQB_025
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_53619.1
Basepair signature
cWW-F-F
Number of instances in this motif group
11

Unit IDs

8BHP|1|0|U|826
8BHP|1|0|U|827
8BHP|1|0|U|828
8BHP|1|0|A|829
8BHP|1|0|G|830
8BHP|1|0|G|831

Current chains

Chain 0
23S rRNA RRLG-RRNA

Nearby chains

Chain I
50S ribosomal protein L15

Coloring options:


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