HL_8BHP_064

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

8BHP|1|0|G|2751, 8BHP|1|0|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHP_064 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.1266

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

8BHP|1|0|C|2745
8BHP|1|0|U|2746
8BHP|1|0|G|2747
8BHP|1|0|A|2748
8BHP|1|0|A|2749
8BHP|1|0|A|2750
8BHP|1|0|G|2751
8BHP|1|0|C|2752
8BHP|1|0|A|2753
8BHP|1|0|U|2754
8BHP|1|0|C|2755
8BHP|1|0|U|2756
8BHP|1|0|A|2757
8BHP|1|0|A|2758
8BHP|1|0|G|2759

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain E

50S ribosomal protein L6

Chain G

50S ribosomal protein L13

Chain e

50S ribosomal protein L36